Details for gene set KEGG

Table: GSEA Results Summary

Dataset	RNR_GSEA_DESEQ2_FC
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_pos
GeneSet	KEGG_LYSOSOME
Enrichment Score (ES)	0.15786675
Normalized Enrichment Score (NES)	2.0198843
Nominal p-value	0.006085193
FDR q-value	0.042325065
FWER p-Value	0.357

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	AP1M2	878	0.576	-0.0390	Yes
2	ACP5	1692	0.313	-0.0745	Yes
3	ARSB	2050	0.256	-0.0854	Yes
4	CD68	2111	0.249	-0.0803	Yes
5	AP1S3	2515	0.209	-0.0936	Yes
6	MFSD8	2558	0.205	-0.0875	Yes
7	CTNS	2655	0.197	-0.0843	Yes
8	AP3B2	2660	0.196	-0.0761	Yes
9	HEXB	2745	0.190	-0.0722	Yes
10	NPC2	2808	0.185	-0.0672	Yes
11	SUMF1	2963	0.174	-0.0671	Yes
12	AP3M2	3603	0.140	-0.0932	Yes
13	GNPTAB	3820	0.130	-0.0965	Yes
14	AP4S1	3875	0.128	-0.0910	Yes
15	GALC	4029	0.121	-0.0908	Yes
16	MANBA	4391	0.109	-0.1019	Yes
17	CTSK	4509	0.104	-0.0999	Yes
18	LGMN	4557	0.102	-0.0940	Yes
19	SORT1	4766	0.095	-0.0968	Yes
20	CTSG	4891	0.092	-0.0951	Yes
21	CTSB	4967	0.090	-0.0908	Yes
22	PLA2G15	5082	0.087	-0.0885	Yes
23	AP4E1	5139	0.085	-0.0831	Yes
24	ASAH1	5324	0.080	-0.0847	Yes
25	FUCA1	5395	0.078	-0.0801	Yes
26	IGF2R	5404	0.078	-0.0721	Yes
27	AGA	5518	0.075	-0.0698	Yes
28	ATP6V0A2	5853	0.066	-0.0794	Yes
29	ATP6AP1	6196	0.058	-0.0895	Yes
30	TPP1	6379	0.053	-0.0909	Yes
31	SLC17A5	6574	0.049	-0.0930	Yes
32	HEXA	6591	0.049	-0.0855	Yes
33	SCARB2	6680	0.047	-0.0818	Yes
34	GNS	6983	0.040	-0.0897	Yes
35	ENTPD4	7109	0.037	-0.0881	Yes
36	ATP6V1H	7246	0.034	-0.0870	Yes
37	DNASE2	7263	0.034	-0.0795	Yes
38	CTSZ	7482	0.029	-0.0828	Yes
39	CTSS	7557	0.028	-0.0784	Yes
40	AP3M1	7564	0.027	-0.0704	Yes
41	CTSF	7619	0.026	-0.0649	Yes
42	CLTCL1	7758	0.024	-0.0639	Yes
43	LAPTM4A	7967	0.020	-0.0668	Yes
44	M6PR	7985	0.019	-0.0593	Yes
45	CLTC	8059	0.018	-0.0548	Yes
46	AP1G1	8083	0.018	-0.0477	Yes
47	AP3B1	8177	0.016	-0.0443	Yes
48	CLN3	8354	0.012	-0.0454	Yes
49	CLN5	8442	0.010	-0.0417	Yes
50	AP1M1	8518	0.009	-0.0373	Yes
51	ARSG	8830	0.003	-0.0457	Yes
52	CTSA	8872	0.002	-0.0395	Yes
53	LAMP2	8883	0.001	-0.0317	Yes
54	PPT2	8901	0.001	-0.0242	Yes
55	LAMP1	8925	0.001	-0.0170	Yes
56	CTSO	8985	-0.000	-0.0118	Yes
57	GBA	9148	-0.004	-0.0121	Yes
58	NAGA	9289	-0.007	-0.0113	Yes
59	PSAP	9306	-0.007	-0.0038	Yes
60	HYAL1	9396	-0.009	-0.0002	Yes
61	PPT1	9515	-0.011	0.0019	Yes
62	HGSNAT	9557	-0.012	0.0080	Yes
63	AP3S2	9607	-0.013	0.0138	Yes
64	LIPA	9840	-0.018	0.0097	Yes
65	NEU1	10000	-0.020	0.0095	Yes
66	GLB1	10074	-0.022	0.0139	Yes
67	GNPTG	10143	-0.023	0.0187	Yes
68	GAA	10170	-0.024	0.0257	Yes
69	NAPSA	10338	-0.027	0.0251	Yes
70	AP3S1	10403	-0.028	0.0300	Yes
71	SLC11A2	10420	-0.028	0.0375	Yes
72	MCOLN1	10432	-0.028	0.0454	Yes
73	AP4B1	10523	-0.030	0.0489	Yes
74	CLTA	10609	-0.032	0.0527	Yes
75	MAN2B1	10701	-0.034	0.0562	Yes
76	GGA2	10824	-0.037	0.0580	Yes
77	CD164	10979	-0.041	0.0581	Yes
78	ARSA	11073	-0.043	0.0615	Yes
79	AP1B1	11176	-0.046	0.0644	Yes
80	NAGLU	11204	-0.047	0.0713	Yes
81	SMPD1	11212	-0.047	0.0793	Yes
82	LAPTM4B	11454	-0.052	0.0747	Yes
83	LAPTM5	11567	-0.055	0.0771	Yes
84	ABCA2	11582	-0.055	0.0847	Yes
85	CLTB	11697	-0.058	0.0870	Yes
86	IDS	11714	-0.059	0.0945	Yes
87	CD63	11840	-0.062	0.0962	Yes
88	ATP6V0A1	11852	-0.062	0.1040	Yes
89	SGSH	11881	-0.063	0.1109	Yes
90	AP3D1	12067	-0.067	0.1093	Yes
91	ACP2	12074	-0.067	0.1173	Yes
92	ATP6V0C	12195	-0.070	0.1193	Yes
93	GALNS	12226	-0.070	0.1260	Yes
94	ATP6V0D1	12361	-0.074	0.1272	Yes
95	IDUA	12418	-0.075	0.1326	Yes
96	NPC1	12486	-0.077	0.1374	Yes
97	GUSB	12565	-0.079	0.1416	Yes
98	GGA3	12618	-0.081	0.1472	Yes
99	GGA1	12628	-0.081	0.1551	Yes
100	NAGPA	12952	-0.090	0.1460	Yes
101	AP1S2	12971	-0.091	0.1535	Yes
102	AP4M1	13046	-0.093	0.1579	Yes
103	TCIRG1	13376	-0.104	0.1485	No
104	ATP6V0B	13428	-0.106	0.1541	No
105	AP1S1	13677	-0.114	0.1492	No
106	GM2A	13724	-0.116	0.1551	No
107	CTSD	14380	-0.148	0.1281	No
108	CTSC	14948	-0.181	0.1059	No
109	CTSH	15243	-0.204	0.0984	No
110	SLC11A1	15347	-0.213	0.1012	No
111	GLA	15353	-0.214	0.1094	No
112	ATP6V0A4	15925	-0.278	0.0869	No
113	ATP6V0D2	16336	-0.340	0.0732	No
114	ABCB9	16363	-0.345	0.0802	No
115	DNASE2B	16519	-0.382	0.0802	No
116	CTSE	16716	-0.431	0.0780	No
117	CTSW	17040	-0.513	0.0690	No
118	LAMP3	17734	-0.907	0.0399	No
119	PSAPL1	18246	-1.504	0.0207	No